| Title: | Install and Load Any Package from CRAN, Bioconductor or Github |
|---|---|
| Description: | Made to make your life simpler with packages, by installing and loading a list of packages, whether they are on CRAN, Bioconductor or github. For github, if you do not have the full path, with the maintainer name in it (e.g. "achateigner/topReviGO"), it will be able to load it but not to install it. |
| Authors: | Aurelien Chateigner [aut, cre] |
| Maintainer: | Aurelien Chateigner <[email protected]> |
| License: | CC BY-SA 4.0 |
| Version: | 1.0.5 |
| Built: | 2024-10-29 03:32:37 UTC |
| Source: | https://github.com/achateigner/anylib |
Made to make your life simpler with packages/libraries,
by installing and loading a list of packages, whether they are on CRAN,
Bioconductor or github. For github, if you do not have the full path, with
the maintainer name in it (e.g. "achateigner/topReviGO"), it will not be able
to install it. However, once installed you only need the name of the package.
For more details see the help vignette:
vignette("help", package = "anyLib")
anyLib(pkg, force = FALSE, autoUpdate = TRUE, lib = .libPaths()[1], loadLib = .libPaths(), source = FALSE)anyLib(pkg, force = FALSE, autoUpdate = TRUE, lib = .libPaths()[1], loadLib = .libPaths(), source = FALSE)
pkg |
The package name or the list containing the packages names. |
force |
To force reinstallation of packages. |
autoUpdate |
To select whether Bioconductor packages auto update or not. |
lib |
Where to install the packages |
loadLib |
From where the packages are loaded |
source |
The package to install is a local source file, on the user disk. |
The source option can be a single TRUE or FALSE, or a vector of TRUE and FALSE corresponding to the vector/list of packages. E.g. if source == c(TRUE, FALSE), the first package will be considered as a source file. The file has to be a tar.gz source file, not a binary.
A named vector of booleans showing if the package is loaded properly
# Install and load 1 package from a local source file, which name is in an object: lib <- normalizePath(tempdir(), "/") listOfPackages <- system.file("dummyPackage_0.1.0.tar.gz", package="anyLib") anyLib(listOfPackages, force = TRUE, autoUpdate = FALSE, lib = lib, loadLib = lib, source = TRUE)# Install and load 1 package from a local source file, which name is in an object: lib <- normalizePath(tempdir(), "/") listOfPackages <- system.file("dummyPackage_0.1.0.tar.gz", package="anyLib") anyLib(listOfPackages, force = TRUE, autoUpdate = FALSE, lib = lib, loadLib = lib, source = TRUE)